Savory Breakfast Casserole Muffins

Featured in: Snack Time Heroes

These savory breakfast casserole muffins combine eggs, cheese, and fresh vegetables in a single dish that’s easy to prepare and bake. With optional protein additions like bacon or sausage, they offer flexibility for dietary preferences. The muffins bake to a golden finish and make a convenient, portable option for busy mornings or meal prep. They can be served warm or cold, and stored in the fridge or freezer for quick reheating. Ideal for those seeking a balanced, flavorful morning start with minimal cleanup.

Updated on Wed, 19 Nov 2025 13:43:00 GMT
Golden-brown One-Pot Breakfast Casserole Muffins filled with cheese, veggies, and savory bacon crumbles. Save
Golden-brown One-Pot Breakfast Casserole Muffins filled with cheese, veggies, and savory bacon crumbles. | williesnack.com

Savory, portable breakfast muffins packed with eggs, cheese, and veggies—perfect for meal prep, budget-friendly, and delicious hot or cold.

I started making these breakfast casserole muffins on weekends to save time during busy mornings. They instantly became a hit with our family and now they

Ingredients

  • Base: 8 large eggs, 1/3 cup whole milk (or dairy-free alternative)
  • Vegetables: 1 cup baby spinach (chopped), 1/2 cup red bell pepper (diced), 1/2 cup onion (finely chopped)
  • Protein (optional): 3/4 cup cooked bacon or breakfast sausage (crumbled, omit for vegetarian)
  • Cheese: 1 cup shredded cheddar cheese (or Monterey Jack)
  • Seasonings: 1/2 teaspoon salt, 1/4 teaspoon black pepper, 1/4 teaspoon smoked paprika
  • Oils: 1 tablespoon olive oil or nonstick spray (for greasing muffin tin)

Instructions

Prepare Tin:
Preheat oven to 350°F (175°C). Coat a 12-cup muffin tin with olive oil or nonstick spray.
Mix Base:
In a large bowl, whisk eggs and milk until blended.
Add Fillings:
Stir in spinach, bell pepper, onion, bacon or sausage (if using), cheese, salt, black pepper, and smoked paprika.
Fill Muffin Cups:
Divide mixture evenly among muffin cups, filling each about 3/4 full.
Bake:
Bake for 22 to 25 minutes or until muffins are set and lightly golden.
Cool & Serve:
Let cool for 5 minutes. Run a knife around edges, remove muffins, and serve warm or cool for storage.
Warm, cheesy One-Pot Breakfast Casserole Muffins, a hearty and convenient grab-and-go breakfast option. Save
Warm, cheesy One-Pot Breakfast Casserole Muffins, a hearty and convenient grab-and-go breakfast option. | williesnack.com

We love packing these muffins for on-the-go breakfasts, especially when visiting grandparents or heading out for soccer games early in the morning. Their portability really saves us time and clean-up.

Required Tools

12-cup muffin tin, mixing bowl, whisk, knife, cutting board, oven

Allergen Information

Contains: eggs, milk (dairy), cheese (dairy). May contain: pork (if using bacon or sausage). For dairy-free, use plant-based alternatives and read ingredient labels.

Nutritional Information

Calories: 130, Total Fat: 9 g, Carbohydrates: 2 g, Protein: 9 g (per muffin, made with bacon and cheddar)

A close-up of delicious baked One-Pot Breakfast Casserole Muffins, perfect for meal prep, bursting with flavors. Save
A close-up of delicious baked One-Pot Breakfast Casserole Muffins, perfect for meal prep, bursting with flavors. | williesnack.com

These muffins are perfect to enjoy straight from the oven or to grab for a cheerful breakfast on the go. Keep a batch ready for easy, nutritious mornings.

Recipe Questions & Answers

Can I make these casserole muffins dairy-free?

Yes, substitute whole milk with a plant-based alternative and use dairy-free cheese to keep them dairy-free without sacrificing flavor.

How do I store the muffins for best freshness?

Store muffins in an airtight container in the refrigerator for up to 4 days or freeze for up to 2 months. Reheat in the microwave or oven before serving.

Can I prepare these muffins ahead of time?

Absolutely. These muffins are perfect for meal prep. Prepare and bake them in advance, then cool and store for easy mornings.

What vegetables work best in these muffins?

Spinach, bell peppers, and onions add fresh flavor and texture; you can also add mushrooms or zucchini for variety.

Is it possible to make these muffins vegetarian?

Omit the bacon or sausage and increase the amount of vegetables to keep muffins vegetarian-friendly without losing richness.

Savory Breakfast Casserole Muffins

Savory muffins filled with eggs, cheese, and veggies, perfect for make-ahead breakfasts or snacks.

Prep time
15 min
Time to cook
25 min
Total duration
40 min
Created by Willie Cooper


Skill level Easy

Cuisine American

Total yield 12 Number of servings

Dietary notes No gluten, Reduced carbs

What You'll Need

Base

01 8 large eggs
02 1/3 cup whole milk or dairy-free alternative

Vegetables

01 1 cup baby spinach, chopped
02 1/2 cup red bell pepper, diced
03 1/2 cup onion, finely chopped

Protein (optional)

01 3/4 cup cooked bacon or breakfast sausage, crumbled (omit for vegetarian)

Cheese

01 1 cup shredded cheddar cheese or Monterey Jack

Seasonings

01 1/2 teaspoon salt
02 1/4 teaspoon black pepper
03 1/4 teaspoon smoked paprika

Oils

01 1 tablespoon olive oil or nonstick spray for greasing muffin tin

How to make it

Step 01

Preheat and prepare pan: Preheat oven to 350°F. Grease a 12-cup muffin tin with olive oil or nonstick spray.

Step 02

Combine eggs and milk: Whisk together eggs and milk in a large bowl until fully blended.

Step 03

Add vegetables, protein, cheese, and seasonings: Incorporate spinach, bell pepper, onion, cooked bacon or sausage if using, shredded cheese, salt, black pepper, and smoked paprika into the egg mixture. Stir until evenly distributed.

Step 04

Fill muffin cups: Divide the mixture evenly into the greased muffin tin cups, filling each about three-quarters full.

Step 05

Bake until set: Bake for 22 to 25 minutes, or until the muffins are firm and lightly golden on top.

Step 06

Cool and serve: Allow muffins to cool in the tin for 5 minutes, then loosen edges with a knife and remove. Serve warm or cool completely before storing.

Tools you'll need

  • 12-cup muffin tin
  • Mixing bowl
  • Whisk
  • Knife and cutting board
  • Oven

Allergy details

Review ingredients for potential allergens and ask a medical expert if unsure.
  • Contains eggs and dairy (milk, cheese)
  • May contain pork if bacon or sausage is included

Nutrition Details (per serving)

This nutritional info is for reference only. For health questions, check with a medical professional.
  • Energy: 130
  • Fats: 9 g
  • Carbohydrates: 2 g
  • Proteins: 9 g